# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "tigger" in publications use:'
type: software
license: AGPL-3.0-only
title: 'tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data'
version: 1.1.3
doi: 10.1073/pnas.1417683112
identifiers:
- type: doi
  value: 10.32614/CRAN.package.tigger
abstract: 'Infers the V genotype of an individual from immunoglobulin (Ig) repertoire
  sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This
  information is then used to correct existing V allele calls from among the sample
  sequences. Citations: Gadala-Maria, et al (2015) <https://doi.org/10.1073/pnas.1417683112>,
  Gadala-Maria, et al (2019) <https://doi.org/10.3389/fimmu.2019.00129>.'
authors:
- family-names: Gadala-Maria
  given-names: Daniel
  email: daniel.gadala-maria@yale.edu
- family-names: Marquez
  given-names: Susanna
  email: susanna.marquez@yale.edu
- family-names: Cohen
  given-names: Moriah
  email: moriah.cohen@biu.ac.il
- family-names: Peres
  given-names: Ayelet
  email: ayelet.peres@yale.edu
- family-names: Vander Heiden
  given-names: Jason
  email: jason.vanderheiden@gmail.com
- family-names: Yaari
  given-names: Gur
  email: gur.yaari@yale.edu
- family-names: Kleinstein
  given-names: Steven
  email: steven.kleinstein@yale.edu
preferred-citation:
  type: article
  title: Automated analysis of high-throughput B cell sequencing data reveals a high
    frequency of novel immunoglobulin V gene segment alleles.
  authors:
  - family-names: Gadala-Maria
    given-names: Daniel
    email: daniel.gadala-maria@yale.edu
  - family-names: Yaari
    given-names: Gur
    email: gur.yaari@yale.edu
  - family-names: Uduman
    given-names: Mohamed
  - family-names: Kleinstein
    given-names: Steven H.
    email: steven.kleinstein@yale.edu
  year: '2015'
  doi: 10.1073/pnas.1417683112
  journal: Proceedings of the National Academy of Sciences of the United States of
    America
  issue: '122'
  start: E862-70
repository: https://immcantation.r-universe.dev
repository-code: https://github.com/immcantation/tigger
commit: 157027c0b10037161ace09e53030795f77bc2ab2
url: http://tigger.readthedocs.io
date-released: '2026-04-13'
contact:
- family-names: Marquez
  given-names: Susanna
  email: susanna.marquez@yale.edu
references:
- type: article
  title: Identification of Subject-Specific Immunoglobulin Alleles From Expressed
    Repertoire Sequencing Data.
  authors:
  - family-names: Gadala-Maria
    given-names: Daniel
  - family-names: Gidoni
    given-names: Moriah
  - family-names: Marquez
    given-names: Susanna
  - family-names: Vander Heiden
    given-names: Jason A
  - family-names: Kos
    given-names: Justin T
  - family-names: Watson
    given-names: Corey T
  - family-names: O'Connor
    given-names: Kevin C
  - family-names: Yaari
    given-names: Gur
    email: gur.yaari@biu.ac.il
  - family-names: Kleinstein
    given-names: Steven H.
    email: steven.kleinstein@yale.edu
  year: '2019'
  doi: 10.3389/fimmu.2019.00129
  journal: Frontiers in Immunology
  issue: '10'
  start: '129'